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A
Amir SaberiUpdate name and description
f71c237•1 month ago
pAAV-ABE-CT
5317 bp
All features (21)
HA
Type:cds
Length:27 bp
Location:2222 - 2249
AAV2 ITR
Type:repeat_region
Length:141 bp
Location:2579 - 2720
bGH poly(A) signal
Type:polya_signal
Length:225 bp
Location:2326 - 2551
SV40 NLS
Type:cds
Length:21 bp
Location:2201 - 2222
SP6 promoter
Type:promoter
Length:19 bp
Location:2282 - 2301
f1 ori
Type:origin
Length:456 bp
Location:2794 - 3250
ori
Type:origin
Length:589 bp
Location:4667 - 5256
AmpR
Type:cds
Length:861 bp
Location:3636 - 4497
AmpR promoter
Type:promoter
Length:105 bp
Location:3531 - 3636
AAV2 ITR (alternate)
Type:repeat_region
Length:130 bp
Location:0 - 130
AAV2 ITR
Type:repeat_region
Length:130 bp
Location:2579 - 2709
Amp-R
Type:primer_bind
Length:20 bp
Location:3853 - 3873
BGH-rev
Type:primer_bind
Length:18 bp
Location:2319 - 2337
F1ori-F (site 1)
Type:primer_bind
Length:22 bp
Location:3090 - 3112
F1ori-F (site 2)
Type:primer_bind
Length:10 bp
Location:5007 - 5017
F1ori-R
Type:primer_bind
Length:20 bp
Location:2880 - 2900
pBR322ori-F
Type:primer_bind
Length:20 bp
Location:5155 - 5175
pBRforEco
Type:primer_bind
Length:19 bp
Location:3444 - 3463
pGEX 3'
Type:primer_bind
Length:23 bp
Location:3384 - 3407
pRS-marker
Type:primer_bind
Length:20 bp
Location:3265 - 3285
SP6
Type:primer_bind
Length:18 bp
Location:2282 - 2300
| Color | Name | Type | Direction | Location | Length |
|---|---|---|---|---|---|
HA | cds | → right | 2222 - 2249 | 27 bp | |
AAV2 ITR | repeat_region | → right | 2579 - 2720 | 141 bp | |
bGH poly(A) signal | polya_signal | → right | 2326 - 2551 | 225 bp | |
SV40 NLS | cds | → right | 2201 - 2222 | 21 bp | |
SP6 promoter | promoter | ← left | 2282 - 2301 | 19 bp | |
f1 ori | origin | → right | 2794 - 3250 | 456 bp | |
ori | origin | → right | 4667 - 5256 | 589 bp | |
AmpR | cds | → right | 3636 - 4497 | 861 bp | |
AmpR promoter | promoter | → right | 3531 - 3636 | 105 bp | |
AAV2 ITR (alternate) | repeat_region | → right | 0 - 130 | 130 bp | |
AAV2 ITR | repeat_region | → right | 2579 - 2709 | 130 bp | |
Amp-R | primer_bind | ← left | 3853 - 3873 | 20 bp | |
BGH-rev | primer_bind | ← left | 2319 - 2337 | 18 bp | |
F1ori-F (site 1) | primer_bind | → right | 3090 - 3112 | 22 bp | |
F1ori-F (site 2) | primer_bind | ← left | 5007 - 5017 | 10 bp | |
F1ori-R | primer_bind | ← left | 2880 - 2900 | 20 bp | |
pBR322ori-F | primer_bind | → right | 5155 - 5175 | 20 bp | |
pBRforEco | primer_bind | ← left | 3444 - 3463 | 19 bp | |
pGEX 3' | primer_bind | → right | 3384 - 3407 | 23 bp | |
pRS-marker | primer_bind | ← left | 3265 - 3285 | 20 bp | |
SP6 | primer_bind | ← left | 2282 - 2300 | 18 bp |