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Amir SaberiUpdate construct names and descriptions
42dc991•1 month ago
pGL4.18 CMV-Luc
6544 bp
All features (26)
pause site
Type:other
Length:92 bp
Location:6270 - 6362
poly(A) signal
Type:polya_signal
Length:49 bp
Location:6208 - 6257
poly(A) signal
Type:polya_signal
Length:49 bp
Location:4080 - 4129
SV40 poly(A) signal
Type:polya_signal
Length:122 bp
Location:2558 - 2680
SV40 ori
Type:origin
Length:136 bp
Location:3081 - 3217
SV40 enhancer
Type:enhancer
Length:192 bp
Location:2873 - 3065
SV40 promoter
Type:promoter
Length:358 bp
Location:2873 - 3231
CMV promoter
Type:promoter
Length:204 bp
Location:380 - 584
CMV enhancer
Type:enhancer
Length:304 bp
Location:76 - 380
hPEST
Type:cds
Length:120 bp
Location:2387 - 2507
luciferase
Type:cds
Length:1650 bp
Location:734 - 2384
Kozak sequence
Type:regulatory
Length:10 bp
Location:728 - 738
ori
Type:origin
Length:589 bp
Location:4455 - 5044
NeoR/KanR
Type:cds
Length:795 bp
Location:3261 - 4056
AmpR
Type:cds
Length:861 bp
Location:5243 - 6104
CMV-F
Type:primer_bind
Length:21 bp
Location:533 - 554
EBV-rev
Type:primer_bind
Length:20 bp
Location:2568 - 2588
L4440
Type:primer_bind
Length:18 bp
Location:4283 - 4301
LNCX
Type:primer_bind
Length:25 bp
Location:579 - 604
pBABE 3'
Type:primer_bind
Length:21 bp
Location:2895 - 2916
pBR322ori-F
Type:primer_bind
Length:20 bp
Location:4534 - 4554
RVprimer3
Type:primer_bind
Length:20 bp
Location:6309 - 6329
SV40pA-R
Type:primer_bind
Length:20 bp
Location:2622 - 2642
SV40pro-F (site 1)
Type:primer_bind
Length:20 bp
Location:3142 - 3162
SV40pro-F (site 2)
Type:primer_bind
Length:12 bp
Location:3165 - 3177
SV40pro-F (site 3)
Type:primer_bind
Length:10 bp
Location:3210 - 3220
| Color | Name | Type | Direction | Location | Length |
|---|---|---|---|---|---|
pause site | other | → right | 6270 - 6362 | 92 bp | |
poly(A) signal | polya_signal | → right | 6208 - 6257 | 49 bp | |
poly(A) signal | polya_signal | → right | 4080 - 4129 | 49 bp | |
SV40 poly(A) signal | polya_signal | → right | 2558 - 2680 | 122 bp | |
SV40 ori | origin | → right | 3081 - 3217 | 136 bp | |
SV40 enhancer | enhancer | → right | 2873 - 3065 | 192 bp | |
SV40 promoter | promoter | → right | 2873 - 3231 | 358 bp | |
CMV promoter | promoter | → right | 380 - 584 | 204 bp | |
CMV enhancer | enhancer | → right | 76 - 380 | 304 bp | |
hPEST | cds | → right | 2387 - 2507 | 120 bp | |
luciferase | cds | → right | 734 - 2384 | 1650 bp | |
Kozak sequence | regulatory | → right | 728 - 738 | 10 bp | |
ori | origin | ← left | 4455 - 5044 | 589 bp | |
NeoR/KanR | cds | → right | 3261 - 4056 | 795 bp | |
AmpR | cds | ← left | 5243 - 6104 | 861 bp | |
CMV-F | primer_bind | → right | 533 - 554 | 21 bp | |
EBV-rev | primer_bind | ← left | 2568 - 2588 | 20 bp | |
L4440 | primer_bind | ← left | 4283 - 4301 | 18 bp | |
LNCX | primer_bind | → right | 579 - 604 | 25 bp | |
pBABE 3' | primer_bind | ← left | 2895 - 2916 | 21 bp | |
pBR322ori-F | primer_bind | ← left | 4534 - 4554 | 20 bp | |
RVprimer3 | primer_bind | → right | 6309 - 6329 | 20 bp | |
SV40pA-R | primer_bind | → right | 2622 - 2642 | 20 bp | |
SV40pro-F (site 1) | primer_bind | → right | 3142 - 3162 | 20 bp | |
SV40pro-F (site 2) | primer_bind | ← left | 3165 - 3177 | 12 bp | |
SV40pro-F (site 3) | primer_bind | → right | 3210 - 3220 | 10 bp |